Prevalence of M. genitalium and U. urealyticum in urine tested for C. trachomatis

Original article



    Mycoplasma genitalium and Ureaplasma urealyticum cause sexually transmitted infections. While M. genitalium is an established aetiological agent, U. urealyticum is still controversial as a pathogen. Testing for these microbes is not yet widely available in Norway, and knowledge of their prevalence is limited. In this study we have investigated the prevalence of M. genitalium and U. urealyticum in a heterogeneous population from Vestfold and Telemark.



    Urine samples (n = 4 665) received by the laboratory for testing for Chlamydia trachomatis in the period from February 2011 to January 2012 were subsequently tested for M. genitalium and U. urealyticum. Samples were analysed using an in-house PCR protocol.



    The prevalence of C. trachomatis, M. genitalium and U. urealyticum was 11.9 %, 3.6 % and 17.9 % respectively. M. genitalium was found most frequently in women aged 20 – 24 years (5.1 %), while the proportion of samples positive for U. urealyticum was greatest in persons aged 15 – 24 years (22.8 %).



    M. genitalium was highly prevalent in urine samples submitted for C. trachomatis testing. M. genitalium testing was requested for only a minority of the samples analysed, suggesting limited knowledge of this microbe. U. urealyticum was the most predominant microbe in the study, which may indicate that it is largely non-pathogenic.


    Mycoplasma genitalium and Ureaplasma urealyticum are transmitted through sexual contact and can cause urogenital infections. While M. genitalium is established as an aetiological agent of genital infections (1), U. urealyticum is still controversial as a pathogen (2, 3). Testing for these microbes is not widespread in Norway and there is no surveillance of their prevalence.

    In 2013, the guidelines for antibiotic treatment of chlamydia infection were amended. Doxycycline is now first-line therapy for chlamydia, as azithromycin use has been shown to contribute to antimicrobial resistance (4). As a result of this change, only 20 – 40 % of M. genitalium infections are now cleared via treatment of urethritis, cervicitis and co-infection with chlamydia. The prevalence of M. genitalium may thus increase (5, 6).

    In Europe, the two most common microbes causing urethritis are Chlamydia trachomatis and M. genitalium; these are detected in 22 % and 7 – 13 % of patients with urethritis respectively (7, 8).

    In men, M. genitalium most often causes urethritis. The microbe is also found in the urethra of men with epididymitis and in tissue from patients with chronic prostatitis (1). The greater complexity of the female urogenital system means that the clinical picture too can be more complex in women. Nevertheless, cervicitis appears to be the most common manifestation of infection (9, 10). Cervicitis is often defined differently across clinical trials, which makes it difficult to draw unambiguous conclusions (1, 11, 12). Cervicitis is a common antecedent of upper genital tract infections (13, 14). In common with C.trachomatis, M. genitalium is associated with reactive arthritis in both women and men (1, 11).

    U. urealyticum is a common microbe in both the female and male urogenital tracts, and is probably less virulent than M. genitalium (2, 15). U. urealyticum is found more frequently in men with urethritis than in non-infected men, and is assumed to be an aetiological agent in urethritis (3, 4, 16).

    Knowledge of the prevalence of M. genitalium and U. urealyticum is important for ensuring a good and targeted testing regime, correct treatment and reduction of infection. In this study we have investigated the prevalence of these microbes in samples submitted for C. trachomatis testing.

    Material and method

    Material and method



    In the period from February 2011 to January 2012, 5 611 urine samples were tested for C. trachomatis. Samples from children under the age of 15 years, those in which the DNA was not intact, and control/follow-up samples were excluded. In all, 4 665 samples were included in the study and tested for M. genitalium and U. urealyticum. Of these, 484 had already undergone routine testing for the latter microbes, and were thus tested twice. Screening samples and samples from patients with symptoms of chlamydia were submitted from both the primary and specialist health service, mainly by gynaecologists and urologists in and outside hospitals.

    Personal data and sample information were obtained from the laboratory information system Mlx (Miclis AS) and were anonymised. Clinical information was often incomplete and was therefore not included in the data. The study was judged by the Regional Ethics Committee to fall outside the scope of the Health Research Act and was therefore exempt from approval requirements.

    Laboratory method

    Laboratory method

    DNA was isolated from 200 μL of sample material with the MagNa Pure LC/Total Nucleic Acid kit (Roche Diagnostics Norway). An in-house multiplex PCR was performed using the LightCycler 480 (Roche).

    The method for qualitative detection of M. genitalium is based on the target gene «gap» (glyceraldehyde-3-phosphate dehydrogenase) (17). For U. urealyticum the target gene was «ureaplasma multiple banded antigen». Taqman probes and primers were synthesised by Eurogentec and supplied by BioNordika/Medprobe.

    Statistical analyses

    Statistical analyses

    Microsoft Excel 2007 (Microsoft, Redmond, WA) was used to calculate the sampling distribution, proportion of positive results and average age with standard deviation. Differences in prevalence between men and women were examined with an unpaired t-test. Confidence intervals were calculated with the online McCallum Layton calculator (18), and the R-3.1.1 calculator for Windows was used to determine significance and to prepare a Venn diagram (19).



    Subject characteristics

    Subject characteristics

    The average age of the entire sample was 26.1 years (SD 9.6 years), with an average age for women of 24.2 years (SD 8.5 years) and for men of 28.7 years (SD 10.4 years). Age and sex distribution are shown in Table 1.

    Table 1

    Number of positive test results for C. trachomatis, M. genitalium, U. urealyticum (percentages in parentheses) with confidence intervals (CI)




    C. trachomatis

    ± 95 % CI

    M. genitalium

    ± 95 % CI

    U. urealyticum

    ± 95 % CI


    4 665



    (11.0 – 12.8)



    (3.1 – 4.1)



    (16.5 – 18.7)


    2 664




    (9.2 – 11.6)



    (2.7 – 4.1)



    (18.7 – 21.7)


    2 001




    (12.3 – 15.3)



    (3.1 – 4.8)



    (12.6 – 15.6)

    Women, age (yrs)

     15 – 19





    (10.9 – 15.1)



    (2.1 – 4.3)



    (23.2 – 28.8)

     20 – 24





    (10.9 – 15.5)



    (3.6 – 6.6)



    (19.2 – 24.8)

     25 – 29





    (4.7 – 10.3)



    (1.2 – 4.8)



    (9.1 – 16.3)

     30 – 39





    (1.4 – 5.1)



    (0.2 – 2.6)



    (7.4 – 13.8)

     40 – 49





    (0.9 – 7.5)



    (0 – 3.3)



    (8.3 – 19.6)

     ≥ 50





    (0 – 7.1)



    (0 – 7.1)



    (3.8 – 25.4)

    Men. age (yrs)



     15 – 19





    (9.2 – 16.8)



    (1.5 – 5.7)



    (17.7 – 27.1)

     20 – 24





    (15.1 – 21.3)



    (1.8 – 4.6)



    (12.0 – 26.4)

     25 – 29





    (12.8 – 20.2)



    (2.3 – 6.3)



    (1.8 – 20.4)

     30 – 39





    (8.5 – 14.9)



    (2.9 – 7.3)



    (0 – 18.3)

     40 – 49





    (3.7 – 10.7)



    (1.3 – 6.5)



    (0 – 19.0)

     ≥ 50





    (0 – 6.1)



    (0 – 6.1)



    (0 – 27.0)



    Of the 4 665 samples tested previously for C. trachomatis, 29 % (1 369/4 665) were positive for one or more of the three sexually transmitted microbes. Of these, 11.9 % were positive for C. trachomatis (555/4 665), 3.6 % (169/4 665) for M. genitalium and 17.6 % (822/4 665) for U. urealyticum. Prevalence specified by age and sex is presented in Table 1.

    The average age of patients who tested positive for C. trachomatis was 23.6 years (SD 6.9 years), for M. genitalium 25.4 years (SD 8.4 years) and for U. urealyticum 23.2 years (SD 8.0 years). In all three cases, the women who tested positive were significantly younger than the men (p < 0.01).

    Analysis of M. genitalium and U. urealyticum was requested for 10 % of the 4 665 samples. Of the samples that were positive for M. genitalium, 89 % (151/169) were first identified in connection with this study. For U. urealyticum, this was the case for 93 % (763/822).

    Of the samples that tested positive for C. trachomatis, 5.9 % (33/555) were also positive for M. genitalium, while 21.6 % (120/555) were positive for U. urealyticum. Of samples positive for M. genitalium, 20.7 % (35/169) were also positive for U. urealyticum. Eleven patients were positive for all three microbes. Figure 1 shows the distribution (in per cent) of the three agents in positive samples.

    Figure 1  Venn diagram showing the number of positive test results and co-infections for Chlamydia trachomatis, Mycoplasma…
    Figure 1 Venn diagram showing the number of positive test results and co-infections for Chlamydia trachomatis, Mycoplasma genitalium and Ureaplasma urealyticum (n = 1 369)


    To the best of our knowledge, this study is the most comprehensive survey of M. genitalium and U. urealyticum in Norway. The prevalence of C. trachomatis has been well mapped and provides information on the population being tested. This forms a basis for evaluating and discussing the prevalence of the other sexually transmitted microbes.

    M. genitalium was relatively common in this study population, with a prevalence of 3.6 % compared to 11.9 % for C. trachomatis. A study from Molde in 2010 showed a significantly lower prevalence of M. genitalium (2 %, n = 950, p = 0.01) (20). This may be due to methodological differences or to differences in the two populations studied.

    Our observations are consistent with figures published from Central Norway from 2012, where M. genitalium was detected in 3.9 % of women and 3.2 % of men in a sample of 1 114 persons (21). In both studies the prevalence was highest in women aged 20 – 24 years: 5.1 % in Vestfold/Telemark and 6.5 % in Central Norway. However, prevalence may be affected by testing patterns for C. trachomatis. For example, figures from the Norwegian Institute of Public Health indicate that women are more likely to undergo routine testing for C. trachomatis, whereas men are more often tested as part of contact tracing or on the basis of symptoms (22).

    Several factors suggest that this study has probably underestimated the prevalence of M. genitalium. There is debate regarding the type of sample most suitable for detecting M. genitalium in women. In a few studies where both urine samples and swabs from the vagina/cervix were tested from the same patients, the positivity rate was higher for the swabs (12, 23). Prevalence may thus have been underestimated in our population, in which only urine samples were examined

    M. genitalium is more difficult to detect than C. trachomatis as the bacterial load of the former is often low. The method used to extract bacterial DNA is therefore critical (24, 25). The importance of choosing an appropriate method is illustrated by a study that compared three different methods for extraction of C. trachomatis DNA and found that the proportion of positive findings ranged from 4.3 % to 7.7 % (26). No association has been observed between bacterial load and disease. Indeed, a small number of bacteria can also cause disease, and detection of weak positive samples is therefore important (24). Emphasising this issue has resulted in methodological improvements in our laboratory.

    The fact that only 10 % of tests in this study were ordered primarily for M. genitalium and U. urealyticum may indicate that there is little emphasis on this issue by those ordering the tests. This is underlined by the fact that in 89 % of the samples positive for M. genitalium, analysis of this microbe had not been requested; the results were therefore not reported back to those who ordered the tests.

    Undiscovered infections lead to increased risk of transmission of infections within the population. As with C. trachomatis, studies have shown that M. genitalium can lead to significant sequelae for some patients. In a large study from the USA, Haggerty and colleagues showed that 15 % of women with clinically suspected pelvic inflammatory disease were infected with M. genitalium, and a causal link was established between the microbe and endometritis (27). A Swedish study from 2012 showed a strong association between M. genitalium infection and pelvic inflammatory disease, as did a recent meta-analysis of mycoplasma infection and female reproductive system diseases (28, 29).

    Untreated pelvic inflammatory disease can have consequences such as ectopic pregnancy, chronic pelvic pain, recurrent pelvic inflammatory disease and infertility (14). M. genitalium has also been observed attaching to sperm in vitro; if large numbers of microbes act in this way, sperm motility may be reduced. Whether this affects male fertility is uncertain (1).

    The course of untreated M. genitalium infection is little documented, and is difficult to study for ethical reasons as the microbe is regarded as pathogenic. Studies of patients with urethritis who were treated empirically with doxycycline show that persistent mycoplasma infections do occur (30). Some of the mechanisms behind the bacterium’s ability to cause persistent infection were revealed in an in vitro study of endocervical cells (31).

    Since the treatment of chlamydia infection is different from that of mycoplasma, diagnostics for M. genitalium will be essential (4, 6). The current study shows that co-infections do occur (Fig. 1) and that proven chlamydia infection does not rule out infection with M. genitalium. Treatment of mycoplasma infection is more complex than that of chlamydia as the former microbe has a high mutation rate and rapidly adapts to its surroundings (1). It thus has an extensive ability to develop antibiotic resistance, and the number of treatment options is decreasing. Today a 5-day course of azithromycin is recommended for treatment of M. genitalium infection (4).

    Genital infections such as urethritis and pelvic inflammatory disease are treated empirically with doxycycline, but this cures only 22 – 45 % of mycoplasma infections (6). M. genitalium was detected in 41 % of men with urethritis who returned after experiencing therapeutic failure with doxycycline (30). Check-ups revealed that these patients subsequently tested negative for M. genitalium after treatment with azithromycin and 90 % were by then symptom free. There were similar findings of M. genitalium infection (44 %) in women with pelvic inflammatory disease who returned after therapeutic failure (27).

    In a recent Norwegian study, macrolide resistance was demonstrated in 48 % of M. genitalium infections (32). This means that azithromycin does not cure all cases of mycoplasma infection either. Moxifloxacin is at present the only treatment option in cases of macrolide resistance. This antibiotic may have unpleasant side effects and is unlicensed in Norway (33). The rapid development of antimicrobial resistance could lead to a situation where it is difficult to provide adequate treatment. However, we can prevent the development and spread of resistant strains by checking therapeutic efficacy after 3 – 4 weeks and by including resistance testing as part of the diagnostic process (6, 34).

    Of the microbes examined in this study, U. urealyticum was the most prevalent (17.6 %) and was most common in those aged 15 – 24 years. A study of students in Northern Norway yielded results similar to ours, although prevalence there was generally lower. C. trachomatis was found in 3.5 % of those tested, M. genitalium in 0.9 % and U. urealyticum in 8.7 % (15).

    In clinical trials, the high prevalence of U. urealyticum in control groups can make results difficult to interpret (16). Nevertheless, a causal link between U. urealyticum and urethritis has been shown in young patients and those with few lifetime sexual partners. This may suggest that repeated exposure to the bacterium can lead to tolerance and asymptomatic infection without inflammation (2, 3). Conditions in the host and variable virulence thus appear to play a part in the microbe’s pathogenicity. This forms a basis for testing patients with symptomatic urethritis for U. urealyticum if no other agents are detected.

    In contrast to chlamydia, genital mycoplasma infections are not defined as infectious diseases of danger to public health in the Infectious Disease Control Act. M. genitalium does not cause merely a harmless «itch»; it can give rise to infections with serious consequences (1, 13, 29). Nevertheless, it is difficult to estimate how often the microbe migrates to the upper genital tract. The majority of cases of pelvic inflammatory disease appear to be asymptomatic and few patients seek treatment (13, 14, 35). In addition, samples are rarely taken from the upper genital tract due to its limited accessibility (12, 13), and study populations are therefore often small. Studies of pelvic inflammatory disease often rely on detection of pathogens in the cervix. Although detected indirectly, it is likely that these microbes can also cause pelvic inflammatory disease, in common with C. trachomatis (14, 29). From prospective studies, it is estimated that approximately 15 % of cases of untreated chlamydia develop into pelvic inflammatory disease, whereas the risk seems to be somewhat lower with mycoplasma infection (35).

    The symptoms of mycoplasma and chlamydia infection cannot be distinguished, but M. genitalium seems to produce symptoms more often (7). We believe that M. genitalium should be included as a standard test when there are symptoms of urethritis and cervicitis, and in pelvic inflammatory disease in women (10, 13, 36). There may also be an indication for testing women prior to surgical abortion (35). Several studies show that M. genitalium is transferred to the partner in 55 – 70 % of cases (7, 9, 30), and partner therapy and possibly contact tracing should be considered.

    Guidelines on antibiotic use in the primary healthcare service recommend the testing of patients with symptoms (4). Testing of asymptomatic individuals is, however, more difficult. In 40 – 60 % of cases, patients with M. genitalium do not have symptoms (10, 11, 25). Asymptomatic carriage is an epidemiological problem and without opportunistic screening, prevalence will increase. Laboratories in Norway unofficially report increasing numbers of positive samples. In a national retrospective study from Denmark (n = 31 600), a significant increase in M. genitalium was seen from 2006 (2.4 %) to 2010 (3.8 %). The increase is considered real, although part of it may be due to methodological improvements (37).

    The spread of infection can be reduced by testing individuals upon change of sexual partner, where the individual in question has multiple sexual partners or a partner with a proven infection. Testing for M. genitalium in common with C. trachomatis may be a natural approach to this preventative work. Before initiating comprehensive screening, the potential consequences – both for society and for the individual – should be examined more closely. Any changes in testing strategy must take into account the increasing antimicrobial resistance and declining therapeutic options.

    In Sweden, where doxycycline is conventionally used to treat chlamydia, studies show similar prevalence of M. genitalium and C. trachomatis (5, 28). When we see an increase both in Sweden and in Denmark, we can expect similar developments in Norway. Surveillance should therefore be established, and clearer guidelines for the testing and treatment of M. genitalium are required. Greater knowledge of the prevalence, pathogenesis and treatment of M. genitalium and U. urealyticum will be important going forward, and more studies should be initiated (38).

    We are grateful to statistician Harald Weedon-Fekjær (Faculty of Medicine. University of Oslo) for assistance with statistical calculations, and genetic technologist Inger-Lill Anthonisen for discussions regarding methodology.


    Recent Articles

    Made by Ramsalt Using Ramsalt Media